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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs73648162 chr9:36872530 G/T PRHOXNB chr13:28552243-28562774:- 0.62 7.65 4.57E-10 Box Plot
ACC rs73680632 chr7:17268091 C/T TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs73680633 chr7:17270822 C/T TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs73680634 chr7:17271046 T/C TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs73704876 chr8:112824236 G/T KRT6C chr12:52862300-52867569:- 0.69 9.27 1.34E-12 Box Plot
ACC rs73866756 chr4:180589716 T/C GC chr4:72607410-72669758:- 0.82 7.53 7.04E-10 Box Plot
ACC rs74032583 chr16:86076038 G/A PRHOXNB chr13:28552243-28562774:- 0.58 7.94 1.57E-10 Box Plot
ACC rs74046660 chr1:1210435 A/G DUPD1 chr10:76797594-76818272:- 0.8 7.69 3.89E-10 Box Plot
ACC rs74092340 chr1:78433801 T/C RESP18 chr2:220192131-220197899:- 0.92 7.61 5.37E-10 Box Plot
ACC rs74113961 chr13:105086278 C/G DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs74113962 chr13:105086287 G/A DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs74113965 chr13:105090410 T/C DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs74145010 chr1:233191379 C/T PRHOXNB chr13:28552243-28562774:- 0.58 7.96 1.49E-10 Box Plot
ACC rs7423056 chr2:124920869 G/A GC chr4:72607410-72669758:- 0.68 9.87 1.65E-13 Box Plot
ACC rs742504 chr1:6408274 A/G PRHOXNB chr13:28552243-28562774:- 0.64 7.87 2.07E-10 Box Plot